Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs4337973 chr6:3266560 C/T 0 119 4.13 42.73 38.33 KM Plot
THYM rs4342009 chr20:29532930 G/A 1.95E-13 119 38.13 50.1 6 KM Plot
THYM rs4342257 chr4:6290037 G/C 2.71E-6 119 25.83 38.83 50.13 KM Plot
THYM rs4343091 chr12:86958849 C/T 0 119 38.13 59.63 4.13 KM Plot
THYM rs4343789 chr4:6285228 C/G 3.54E-6 114 27.13 38.58 50.3 KM Plot
THYM rs4343967 chr6:3267214 C/T 0 117 4.13 42.73 38.83 KM Plot
THYM rs4351817 chr11:11836991 C/T 0.000112 118 41.77 42.73 13.35 KM Plot
THYM rs4355650 chr6:3267158 T/C 0 118 4.13 44.3 38.33 KM Plot
THYM rs436124 chr12:29916839 C/T 6.04E-6 119 25.82 50.07 38.48 KM Plot
THYM rs4362834 chr4:126132263 A/G 0.000143 116 38.33 34.87 44.38 KM Plot
THYM rs4386883 chr7:29715112 C/T 3.55E-13 119 37.63 48.18 6 KM Plot
THYM rs439639 chr12:29917641 A/C 7.02E-6 118 38.48 49.73 25.82 KM Plot
THYM rs4415529 chr1:227486971 T/C 0.000123 119 42.82 37.13 19.63 KM Plot
THYM rs4416547 chr4:6293967 G/A 1.25E-6 119 25.83 38.58 50.13 KM Plot
THYM rs4448861 chr14:78307735 G/A 0.000167 119 24.17 46.43 38.33 KM Plot